Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PNMA1Q8ND90 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 AC126763.1-201ENST00000552015 2118 ntBASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 AL645929.1-201ENST00000420084 975 ntBASIC21.49■■□□□ 1.03
PNMA1Q8ND90 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SDHAP2-201ENST00000455183 2001 ntBASIC21.49■■□□□ 1.03
PNMA1Q8ND90 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.49■■□□□ 1.03
PNMA1Q8ND90 IER3-202ENST00000376377 1350 ntBASIC21.48■■□□□ 1.03
PNMA1Q8ND90 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 MIR662-201ENST00000384847 95 ntBASIC21.48■■□□□ 1.03
PNMA1Q8ND90 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PNMA1Q8ND90 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.47■■□□□ 1.03
PNMA1Q8ND90 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 AL162741.1-201ENST00000565563 1558 ntBASIC21.47■■□□□ 1.03
PNMA1Q8ND90 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.47■■□□□ 1.03
PNMA1Q8ND90 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PNMA1Q8ND90 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PNMA1Q8ND90 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
PNMA1Q8ND90 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PNMA1Q8ND90 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
PNMA1Q8ND90 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms