Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC197Q8NCU1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC197Q8NCU1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC197Q8NCU1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC197Q8NCU1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CCDC197Q8NCU1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 CROCCP1-201ENST00000426910 5675 ntBASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 AC008556.1-201ENST00000610908 2040 ntBASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC197Q8NCU1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 LINC00602-201ENST00000629776 2065 ntBASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AL355472.2-201ENST00000422958 438 ntBASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AL589743.5-201ENST00000616611 1050 ntBASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC197Q8NCU1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 YBX1P10-201ENST00000444752 975 ntBASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 RCC2P6-201ENST00000526625 1557 ntBASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 AC006116.8-202ENST00000587620 1550 ntBASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 AC011270.2-201ENST00000624293 2550 ntBASIC18.37■□□□□ 0.53
CCDC197Q8NCU1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC197Q8NCU1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC197Q8NCU1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC197Q8NCU1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms