Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 HBZP1-201ENST00000354915 429 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 MIR3652-201ENST00000579335 131 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 MIR4674-201ENST00000582457 87 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 AC092119.3-201ENST00000612618 583 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 Z98044.1-201ENST00000632503 1764 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 KRT8P3-201ENST00000519669 1449 ntBASIC20.95■□□□□ 0.94
RETREG2Q8NC44 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 AL645929.1-201ENST00000420084 975 ntBASIC20.94■□□□□ 0.94
RETREG2Q8NC44 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RETREG2Q8NC44 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 RASA4DP-201ENST00000460726 1199 ntBASIC20.93■□□□□ 0.94
RETREG2Q8NC44 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 AC092329.2-201ENST00000598402 547 ntBASIC20.93■□□□□ 0.94
RETREG2Q8NC44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.93■□□□□ 0.94
RETREG2Q8NC44 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 PRELID1P1-202ENST00000567272 903 ntBASIC20.92■□□□□ 0.94
RETREG2Q8NC44 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 NPAP1P7-201ENST00000613027 823 ntBASIC20.92■□□□□ 0.94
RETREG2Q8NC44 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RETREG2Q8NC44 GPAT2P1-201ENST00000444924 1672 ntBASIC20.92■□□□□ 0.94
RETREG2Q8NC44 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms