Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AL356309.3-201ENST00000624132 1934 ntBASIC26.25■■□□□ 1.79
UBR1Q8IWV7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC26.25■■□□□ 1.79
UBR1Q8IWV7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 RNA5SP416-201ENST00000516838 111 ntBASIC26.24■■□□□ 1.79
UBR1Q8IWV7 UNC93B6-202ENST00000528242 690 ntBASIC26.24■■□□□ 1.79
UBR1Q8IWV7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 AC107918.4-202ENST00000641623 219 ntBASIC26.24■■□□□ 1.79
UBR1Q8IWV7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 AC141586.3-201ENST00000562166 1838 ntBASIC26.24■■□□□ 1.79
UBR1Q8IWV7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBR1Q8IWV7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 COA5-202ENST00000409997 557 ntTSL 4 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 MTDHP4-201ENST00000600287 670 ntBASIC26.23■■□□□ 1.79
UBR1Q8IWV7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC26.23■■□□□ 1.79
UBR1Q8IWV7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 METTL21AP1-201ENST00000438852 635 ntBASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AC068472.1-201ENST00000474589 881 ntBASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBR1Q8IWV7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 AC125437.2-201ENST00000625180 2167 ntBASIC26.21■■□□□ 1.79
UBR1Q8IWV7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC26.21■■□□□ 1.79
UBR1Q8IWV7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC26.2■■□□□ 1.79
UBR1Q8IWV7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBR1Q8IWV7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms