Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 HEIH-201ENST00000623091 1652 ntBASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CRLF3Q8IUI8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 KRASP1-201ENST00000407852 552 ntBASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 AL596275.1-201ENST00000423464 877 ntBASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 GNAS-203ENST00000306120 1878 ntBASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.5■□□□□ 0.55
CRLF3Q8IUI8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AC133681.1-201ENST00000465482 601 ntBASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.49■□□□□ 0.55
CRLF3Q8IUI8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 MIR718-201ENST00000390190 70 ntBASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 TSPY23P-201ENST00000440136 739 ntBASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 PRKY-204ENST00000533551 1019 ntBASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms