Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 KRT16P1-201ENST00000399124 1418 ntBASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 KRT8P11-201ENST00000409686 1436 ntBASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 RCC2P6-201ENST00000526625 1557 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC004951.3-201ENST00000418645 1148 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 POU5F1P3-201ENST00000428824 1078 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC004980.1-204ENST00000429707 299 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC128676.1-201ENST00000454392 318 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC026271.3-201ENST00000571884 352 ntBASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL55Q7Z7F7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 MYC-208ENST00000641036 567 ntBASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AL031985.4-201ENST00000642138 673 ntBASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL55Q7Z7F7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms