Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 AC141257.4-201ENST00000634557 245 ntBASIC17.36■□□□□ 0.37
RTL4Q6ZR62 AC136944.6-201ENST00000634818 245 ntBASIC17.36■□□□□ 0.37
RTL4Q6ZR62 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTL4Q6ZR62 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
RTL4Q6ZR62 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 AL590326.2-201ENST00000625139 305 ntBASIC17.35■□□□□ 0.37
RTL4Q6ZR62 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 KRT8P3-201ENST00000519669 1449 ntBASIC17.35■□□□□ 0.37
RTL4Q6ZR62 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTL4Q6ZR62 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 KRT8P45-201ENST00000414328 1447 ntBASIC17.34■□□□□ 0.37
RTL4Q6ZR62 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AC104076.2-201ENST00000448912 469 ntBASIC17.34■□□□□ 0.37
RTL4Q6ZR62 DUX4L26-201ENST00000489078 1255 ntBASIC17.34■□□□□ 0.37
RTL4Q6ZR62 COX11P1-201ENST00000489116 835 ntBASIC17.34■□□□□ 0.37
RTL4Q6ZR62 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AC006011.2-201ENST00000621313 1158 ntBASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTL4Q6ZR62 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms