Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF111Q6ZNA4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18■□□□□ 0.47
RNF111Q6ZNA4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 AL160286.2-201ENST00000567150 934 ntBASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF111Q6ZNA4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 AC083906.6-201ENST00000641366 219 ntBASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 AL031985.4-201ENST00000642138 673 ntBASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF111Q6ZNA4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms