Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 TSPY17P-201ENST00000450329 467 ntBASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 CYP2D8P-201ENST00000433633 1490 ntBASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 AC034236.2-201ENST00000606662 1610 ntBASIC18.38■□□□□ 0.53
ZNF549Q6P9A3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 AC007663.1-201ENST00000438948 1240 ntBASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 ABALON-201ENST00000629058 1903 ntBASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 AC135776.1-201ENST00000319817 2481 ntBASIC18.37■□□□□ 0.53
ZNF549Q6P9A3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 AL596275.1-201ENST00000423464 877 ntBASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 AL162741.1-201ENST00000565563 1558 ntBASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 CR769767.2-201ENST00000622735 460 ntBASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF549Q6P9A3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms