Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14□□□□□ -0.17
MRPL54Q6P161 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14□□□□□ -0.17
MRPL54Q6P161 NME4-202ENST00000382940 766 ntTSL 3 BASIC14□□□□□ -0.17
MRPL54Q6P161 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 MCRIP2P1-201ENST00000394346 511 ntBASIC14□□□□□ -0.17
MRPL54Q6P161 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14□□□□□ -0.17
MRPL54Q6P161 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 AL499627.1-201ENST00000569373 2188 ntBASIC14□□□□□ -0.17
MRPL54Q6P161 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 REXO1L9P-201ENST00000604264 2108 ntBASIC14□□□□□ -0.17
MRPL54Q6P161 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 TFP1-202ENST00000475455 1573 ntBASIC14□□□□□ -0.17
MRPL54Q6P161 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MRPL54Q6P161 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL54Q6P161 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14□□□□□ -0.17
MRPL54Q6P161 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 AC016405.3-201ENST00000607710 860 ntBASIC13.99□□□□□ -0.17
MRPL54Q6P161 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PP12613-201ENST00000424958 2230 ntBASIC13.99□□□□□ -0.17
MRPL54Q6P161 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
MRPL54Q6P161 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL54Q6P161 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms