Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 MIR1224-201ENST00000408193 85 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC104076.2-201ENST00000448912 469 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC139887.4-201ENST00000607877 719 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AL590326.2-201ENST00000625139 305 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC068587.9-201ENST00000641814 219 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC135050.7-201ENST00000624508 2218 ntBASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC39BQ5VTQ0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 AC010331.1-201ENST00000611423 582 ntBASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 AC083906.6-201ENST00000641366 219 ntBASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC39BQ5VTQ0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TTC39BQ5VTQ0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 AL390961.4-201ENST00000623958 2535 ntBASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 KRT8P7-201ENST00000533003 1432 ntBASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC39BQ5VTQ0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms