Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 SDHAP2-201ENST00000455183 2001 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AC135050.7-201ENST00000624508 2218 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 RCN1P1-201ENST00000400413 996 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AC104390.1-201ENST00000555663 520 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 GCSHP2-201ENST00000560971 527 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AL441883.1-201ENST00000566170 1045 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB6CQ53S08 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 AL163051.1-201ENST00000569214 1512 ntBASIC19.25■□□□□ 0.67
RAB6CQ53S08 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB6CQ53S08 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 AL137013.1-201ENST00000432946 1228 ntBASIC19.24■□□□□ 0.67
RAB6CQ53S08 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 AC139887.4-201ENST00000607877 719 ntBASIC19.24■□□□□ 0.67
RAB6CQ53S08 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 AC006011.2-201ENST00000621313 1158 ntBASIC19.24■□□□□ 0.67
RAB6CQ53S08 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB6CQ53S08 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB6CQ53S08 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB6CQ53S08 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB6CQ53S08 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB6CQ53S08 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB6CQ53S08 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB6CQ53S08 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms