Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 AC083906.2-201ENST00000511578 360 ntBASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 MIR4758-201ENST00000577688 71 ntBASIC16.56■□□□□ 0.24
CCDC58Q4VC31 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC58Q4VC31 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 SLC25A6P5-201ENST00000435663 894 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 AC008687.6-201ENST00000596318 630 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 HLA-A-209ENST00000638375 975 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 AC068587.9-201ENST00000641814 219 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 AC068418.2-201ENST00000577309 3703 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 MTMR9LP-203ENST00000426597 1545 ntBASIC16.55■□□□□ 0.24
CCDC58Q4VC31 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC58Q4VC31 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 SLC29A4P1-201ENST00000398760 971 ntBASIC16.54■□□□□ 0.24
CCDC58Q4VC31 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.54■□□□□ 0.24
CCDC58Q4VC31 CROCCP5-201ENST00000436658 830 ntBASIC16.54■□□□□ 0.24
CCDC58Q4VC31 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC58Q4VC31 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms