Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RFX4Q33E94 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RFX4Q33E94 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.24■□□□□ 0.35
RFX4Q33E94 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 MTMR9LP-203ENST00000426597 1545 ntBASIC17.23■□□□□ 0.35
RFX4Q33E94 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX4Q33E94 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX4Q33E94 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX4Q33E94 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX4Q33E94 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX4Q33E94 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RFX4Q33E94 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RFX4Q33E94 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 AC009053.2-201ENST00000563701 2365 ntBASIC17.23■□□□□ 0.35
RFX4Q33E94 RCC2P6-201ENST00000526625 1557 ntBASIC17.23■□□□□ 0.35
RFX4Q33E94 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX4Q33E94 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.23■□□□□ 0.35
RFX4Q33E94 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFX4Q33E94 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFX4Q33E94 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RFX4Q33E94 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 AL499627.1-201ENST00000569373 2188 ntBASIC17.22■□□□□ 0.35
RFX4Q33E94 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX4Q33E94 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 POM121L13P-201ENST00000422362 380 ntBASIC17.22■□□□□ 0.35
RFX4Q33E94 TSPY23P-201ENST00000440136 739 ntBASIC17.22■□□□□ 0.35
RFX4Q33E94 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX4Q33E94 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX4Q33E94 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 PRKY-204ENST00000533551 1019 ntBASIC17.22■□□□□ 0.35
RFX4Q33E94 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX4Q33E94 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX4Q33E94 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 FLJ13224-201ENST00000313737 1514 ntBASIC17.21■□□□□ 0.35
RFX4Q33E94 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RFX4Q33E94 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms