Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CYP2D8P-201ENST00000433633 1490 ntBASIC17.86■□□□□ 0.45
PCDH1Q08174 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH1Q08174 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDH1Q08174 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH1Q08174 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH1Q08174 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDH1Q08174 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 MMP23A-201ENST00000234610 1017 ntBASIC17.85■□□□□ 0.45
PCDH1Q08174 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDH1Q08174 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH1Q08174 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH1Q08174 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH1Q08174 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH1Q08174 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH1Q08174 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH1Q08174 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH1Q08174 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH1Q08174 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH1Q08174 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 KRT8P9-201ENST00000558927 1449 ntBASIC17.84■□□□□ 0.45
PCDH1Q08174 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 AC128688.1-201ENST00000487626 519 ntBASIC17.84■□□□□ 0.45
PCDH1Q08174 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PCDH1Q08174 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDH1Q08174 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH1Q08174 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH1Q08174 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH1Q08174 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH1Q08174 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDH1Q08174 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 AL163051.1-201ENST00000569214 1512 ntBASIC17.83■□□□□ 0.45
PCDH1Q08174 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDH1Q08174 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PCDH1Q08174 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH1Q08174 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 ABALON-201ENST00000629058 1903 ntBASIC17.83■□□□□ 0.44
PCDH1Q08174 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.83■□□□□ 0.44
PCDH1Q08174 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 AL596275.1-201ENST00000423464 877 ntBASIC17.83■□□□□ 0.44
PCDH1Q08174 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH1Q08174 NAPSB-206ENST00000562112 1266 ntBASIC17.83■□□□□ 0.44
PCDH1Q08174 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDH1Q08174 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
PCDH1Q08174 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH1Q08174 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH1Q08174 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PCDH1Q08174 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH1Q08174 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH1Q08174 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH1Q08174 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms