Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 AC078846.1-201ENST00000608694 7083 ntBASIC8.5□□□□□ -1.054e-6■□□□□ 10.9
SRSF1Q07955 SMC1A-203ENST00000428014 868 ntTSL 38.45□□□□□ -1.064e-6■□□□□ 10.9
SRSF1Q07955 GAS8-207ENST00000564392 479 ntTSL 38.42□□□□□ -1.064e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-215ENST00000589773 678 ntTSL 38.27□□□□□ -1.094e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-218ENST00000590348 832 ntTSL 58.25□□□□□ -1.094e-6■□□□□ 10.9
SRSF1Q07955 GAS8-219ENST00000569558 3856 ntTSL 27.98□□□□□ -1.134e-6■□□□□ 10.9
SRSF1Q07955 CNNM3-203ENST00000465224 2607 ntTSL 1 (best)7.92□□□□□ -1.144e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-214ENST00000589586 620 ntTSL 37.55□□□□□ -1.24e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-221ENST00000590886 543 ntTSL 47.16□□□□□ -1.264e-6■□□□□ 10.9
SRSF1Q07955 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.314e-6■□□□□ 10.9
SRSF1Q07955 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.87□□□□□ -1.312e-8■□□□□ 10.9
SRSF1Q07955 UTP6-207ENST00000579878 582 ntTSL 26.23□□□□□ -1.414e-6■□□□□ 10.9
SRSF1Q07955 ACACA-228ENST00000613146 3974 ntTSL 1 (best)6.06□□□□□ -1.442e-8■□□□□ 10.9
SRSF1Q07955 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.473e-7■□□□□ 10.9
SRSF1Q07955 DNAJC7-210ENST00000588641 782 ntTSL 35.76□□□□□ -1.494e-6■□□□□ 10.9
SRSF1Q07955 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.514e-6■□□□□ 10.9
SRSF1Q07955 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.26□□□□□ -1.573e-7■□□□□ 10.9
SRSF1Q07955 ACACA-224ENST00000612007 451 ntTSL 52.67□□□□□ -1.982e-8■□□□□ 10.9
SRSF1Q07955 HNRNPH1-207ENST00000503105 559 ntTSL 317.1■□□□□ 0.331e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-224ENST00000514731 1371 ntTSL 212.66□□□□□ -0.381e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-211ENST00000504779 792 ntTSL 512.64□□□□□ -0.391e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-218ENST00000510678 1996 ntTSL 512.49□□□□□ -0.411e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.69□□□□□ -0.541e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-223ENST00000514332 2444 ntTSL 211.29□□□□□ -0.61e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.611e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.631e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.771e-17■□□□□ 10.9
SRSF1Q07955 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC10.23□□□□□ -0.771e-17■□□□□ 10.9
SRSF1Q07955 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.677e-7■□□□□ 10.9
SRSF1Q07955 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.12□□□□□ -1.757e-7■□□□□ 10.9
SRSF1Q07955 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.123e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.75□□□□□ -0.053e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)14.3□□□□□ -0.123e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.9□□□□□ -0.183e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.88□□□□□ -0.353e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.73□□□□□ -0.373e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.35□□□□□ -0.433e-9■□□□□ 10.9
SRSF1Q07955 SLC3A2-220ENST00000542922 2174 ntTSL 210.41□□□□□ -0.743e-9■□□□□ 10.9
SRSF1Q07955 TJAP1-211ENST00000459851 480 ntTSL 315.97■□□□□ 0.152e-6■□□□□ 10.9
SRSF1Q07955 TJAP1-212ENST00000478173 666 ntTSL 514.11□□□□□ -0.152e-6■□□□□ 10.9
SRSF1Q07955 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 318.67■□□□□ 0.583e-8■□□□□ 10.9
SRSF1Q07955 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.036e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.18□□□□□ -0.36e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.426e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.26□□□□□ -0.456e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-210ENST00000510855 686 ntTSL 211.95□□□□□ -0.56e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-213ENST00000511987 1298 ntTSL 1 (best)9.77□□□□□ -0.856e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-204ENST00000505173 2369 ntTSL 55.67□□□□□ -1.56e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.56□□□□□ -1.526e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-219ENST00000514613 2523 ntTSL 25.54□□□□□ -1.526e-11■□□□□ 10.9
SRSF1Q07955 SPAG9-203ENST00000502329 528 ntTSL 25.09□□□□□ -1.596e-11■□□□□ 10.9
SRSF1Q07955 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.764e-6■□□□□ 10.9
SRSF1Q07955 TUFM-203ENST00000565012 966 ntTSL 516.08■□□□□ 0.161e-9■□□□□ 10.9
SRSF1Q07955 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.191e-9■□□□□ 10.9
SRSF1Q07955 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC11.03□□□□□ -0.644e-6■□□□□ 10.9
SRSF1Q07955 GABRE-210ENST00000489333 592 ntTSL 27.42□□□□□ -1.221e-9■□□□□ 10.9
SRSF1Q07955 GABRE-208ENST00000483564 2747 ntTSL 37.24□□□□□ -1.251e-9■□□□□ 10.9
SRSF1Q07955 GABRE-212ENST00000495862 238 ntTSL 34.21□□□□□ -1.741e-9■□□□□ 10.9
SRSF1Q07955 TRIR-204ENST00000591254 988 ntTSL 224.74■■□□□ 1.551e-10■□□□□ 10.9
SRSF1Q07955 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.31■■□□□ 1.321e-10■□□□□ 10.9
SRSF1Q07955 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.9■■□□□ 1.11e-10■□□□□ 10.9
SRSF1Q07955 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.881e-10■□□□□ 10.9
SRSF1Q07955 MAP4K4-218ENST00000498066 1017 ntTSL 212.36□□□□□ -0.434e-20■□□□□ 10.9
SRSF1Q07955 MAP4K4-216ENST00000491743 646 ntTSL 48.44□□□□□ -1.064e-20■□□□□ 10.9
SRSF1Q07955 OAZ1-206ENST00000589739 657 ntTSL 215.94■□□□□ 0.149e-15■□□□□ 10.9
SRSF1Q07955 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.41□□□□□ -0.12e-9■□□□□ 10.9
SRSF1Q07955 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.12□□□□□ -0.472e-9■□□□□ 10.9
SRSF1Q07955 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.752e-9■□□□□ 10.9
SRSF1Q07955 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC6.74□□□□□ -1.332e-9■□□□□ 10.9
SRSF1Q07955 CCDC84-203ENST00000526463 1295 ntTSL 1 (best)19.28■□□□□ 0.681e-6■□□□□ 10.8
SRSF1Q07955 CCDC84-202ENST00000524670 885 ntTSL 516.2■□□□□ 0.181e-6■□□□□ 10.8
SRSF1Q07955 CCDC84-206ENST00000532132 1119 ntTSL 1 (best)15.37■□□□□ 0.051e-6■□□□□ 10.8
SRSF1Q07955 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.081e-6■□□□□ 10.8
SRSF1Q07955 COL9A2-208ENST00000488463 1005 ntTSL 513.31□□□□□ -0.287e-7■□□□□ 10.8
SRSF1Q07955 CANX-218ENST00000514032 1876 ntTSL 216.73■□□□□ 0.273e-11■□□□□ 10.8
SRSF1Q07955 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.413e-11■□□□□ 10.8
SRSF1Q07955 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.733e-11■□□□□ 10.8
SRSF1Q07955 CANX-210ENST00000505090 485 ntTSL 210.41□□□□□ -0.743e-11■□□□□ 10.8
SRSF1Q07955 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.853e-11■□□□□ 10.8
SRSF1Q07955 MACF1-216ENST00000476350 5304 ntTSL 26.46□□□□□ -1.373e-6■□□□□ 10.8
SRSF1Q07955 MACF1-229ENST00000530262 6257 ntTSL 56.06□□□□□ -1.443e-6■□□□□ 10.8
SRSF1Q07955 FUS-212ENST00000569760 639 ntTSL 222.37■■□□□ 1.179e-12■□□□□ 10.8
SRSF1Q07955 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.13e-6■□□□□ 10.8
SRSF1Q07955 COL9A3-213ENST00000489045 838 ntTSL 521.92■■□□□ 1.12e-11■□□□□ 10.8
SRSF1Q07955 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.324e-11■□□□□ 10.8
SRSF1Q07955 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.26■■□□□ 1.154e-11■□□□□ 10.8
SRSF1Q07955 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.464e-11■□□□□ 10.8
SRSF1Q07955 DHRS11-211ENST00000612205 638 ntTSL 224.04■■□□□ 1.441e-8■□□□□ 10.8
SRSF1Q07955 DHRS11-212ENST00000612538 756 ntTSL 523.59■■□□□ 1.371e-8■□□□□ 10.8
SRSF1Q07955 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.961e-8■□□□□ 10.8
SRSF1Q07955 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.13■□□□□ 0.651e-8■□□□□ 10.8
SRSF1Q07955 MAD1L1-207ENST00000429779 555 ntTSL 417.43■□□□□ 0.381e-8■□□□□ 10.8
SRSF1Q07955 LAMA5-208ENST00000474128 579 ntTSL 317.05■□□□□ 0.321e-8■□□□□ 10.8
SRSF1Q07955 L3MBTL4-205ENST00000580162 457 ntTSL 316.81■□□□□ 0.281e-8■□□□□ 10.8
SRSF1Q07955 XPO6-223ENST00000574435 765 ntTSL 514.06□□□□□ -0.161e-8■□□□□ 10.8
SRSF1Q07955 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.491e-8■□□□□ 10.8
SRSF1Q07955 XPO6-222ENST00000573645 509 ntTSL 311.47□□□□□ -0.571e-8■□□□□ 10.8
SRSF1Q07955 PANK2-203ENST00000464452 771 ntTSL 310.84□□□□□ -0.679e-7■□□□□ 10.8
SRSF1Q07955 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC8.68□□□□□ -1.021e-8■□□□□ 10.8
SRSF1Q07955 XPO6-219ENST00000570033 558 ntTSL 44.08□□□□□ -1.761e-8■□□□□ 10.8
Retrieved 100 of 14,836 protein–RNA pairs in 19 ms