Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.91■□□□□ 0.14
AP3S2P59780 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
AP3S2P59780 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.91■□□□□ 0.14
AP3S2P59780 AC008694.1-202ENST00000636953 945 ntBASIC15.91■□□□□ 0.14
AP3S2P59780 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.91■□□□□ 0.14
AP3S2P59780 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP3S2P59780 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
AP3S2P59780 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
AP3S2P59780 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.91■□□□□ 0.14
AP3S2P59780 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3S2P59780 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.9■□□□□ 0.14
AP3S2P59780 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
AP3S2P59780 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3S2P59780 AL355472.2-201ENST00000422958 438 ntBASIC15.9■□□□□ 0.14
AP3S2P59780 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3S2P59780 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3S2P59780 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
AP3S2P59780 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3S2P59780 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP3S2P59780 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3S2P59780 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S2P59780 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 AC080080.1-201ENST00000625121 2420 ntBASIC15.89■□□□□ 0.13
AP3S2P59780 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
AP3S2P59780 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S2P59780 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
AP3S2P59780 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 AC073210.2-201ENST00000430369 194 ntBASIC15.89■□□□□ 0.13
AP3S2P59780 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP3S2P59780 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.89■□□□□ 0.13
AP3S2P59780 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S2P59780 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3S2P59780 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3S2P59780 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3S2P59780 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3S2P59780 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms