Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SPDYE15P-201ENST00000424157 909 ntBASIC17.72■□□□□ 0.43
VSX2P58304 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.72■□□□□ 0.43
VSX2P58304 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.72■□□□□ 0.43
VSX2P58304 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.72■□□□□ 0.43
VSX2P58304 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.72■□□□□ 0.43
VSX2P58304 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.71■□□□□ 0.43
VSX2P58304 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
VSX2P58304 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.71■□□□□ 0.43
VSX2P58304 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.71■□□□□ 0.43
VSX2P58304 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.71■□□□□ 0.43
VSX2P58304 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.71■□□□□ 0.43
VSX2P58304 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 AC112907.2-201ENST00000448639 330 ntBASIC17.71■□□□□ 0.43
VSX2P58304 RASA4DP-201ENST00000460726 1199 ntBASIC17.71■□□□□ 0.43
VSX2P58304 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 AC104390.1-201ENST00000555663 520 ntBASIC17.71■□□□□ 0.43
VSX2P58304 AL157888.1-201ENST00000631930 593 ntBASIC17.71■□□□□ 0.43
VSX2P58304 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.71■□□□□ 0.43
VSX2P58304 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.71■□□□□ 0.43
VSX2P58304 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
VSX2P58304 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
VSX2P58304 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VSX2P58304 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSX2P58304 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.71■□□□□ 0.42
VSX2P58304 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
VSX2P58304 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
VSX2P58304 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.7■□□□□ 0.42
VSX2P58304 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 AL671277.2-201ENST00000458060 996 ntBASIC17.7■□□□□ 0.42
VSX2P58304 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.7■□□□□ 0.42
VSX2P58304 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.7■□□□□ 0.42
VSX2P58304 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.7■□□□□ 0.42
VSX2P58304 AC010240.3-201ENST00000607688 395 ntBASIC17.7■□□□□ 0.42
VSX2P58304 MYC-208ENST00000641036 567 ntBASIC17.7■□□□□ 0.42
VSX2P58304 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.7■□□□□ 0.42
VSX2P58304 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 BX323043.1-201ENST00000641006 1765 ntBASIC17.7■□□□□ 0.42
VSX2P58304 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VSX2P58304 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSX2P58304 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.69■□□□□ 0.42
VSX2P58304 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 AC020763.4-201ENST00000623414 4170 ntBASIC17.69■□□□□ 0.42
VSX2P58304 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.69■□□□□ 0.42
VSX2P58304 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VSX2P58304 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VSX2P58304 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.69■□□□□ 0.42
VSX2P58304 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.69■□□□□ 0.42
VSX2P58304 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSX2P58304 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms