Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN2P57739 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN2P57739 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN2P57739 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN2P57739 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN2P57739 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN2P57739 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN2P57739 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN2P57739 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN2P57739 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN2P57739 AP000867.3-201ENST00000524675 377 ntBASIC18.25■□□□□ 0.51
CLDN2P57739 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN2P57739 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 AC024563.2-201ENST00000603282 481 ntBASIC18.25■□□□□ 0.51
CLDN2P57739 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 AC083906.6-201ENST00000641366 219 ntBASIC18.25■□□□□ 0.51
CLDN2P57739 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN2P57739 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN2P57739 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CLDN2P57739 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN2P57739 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN2P57739 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN2P57739 TOB2P1-201ENST00000469761 992 ntBASIC18.24■□□□□ 0.51
CLDN2P57739 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN2P57739 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN2P57739 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN2P57739 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN2P57739 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 IGHV3-41-201ENST00000613121 348 ntBASIC18.24■□□□□ 0.51
CLDN2P57739 AL691432.3-201ENST00000621860 400 ntBASIC18.24■□□□□ 0.51
CLDN2P57739 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN2P57739 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN2P57739 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN2P57739 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.23■□□□□ 0.51
CLDN2P57739 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN2P57739 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 AC026396.1-201ENST00000419388 421 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 TPM4P1-201ENST00000436100 807 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 DRAXINP1-201ENST00000437611 948 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLDN2P57739 GPR32P1-201ENST00000601788 811 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN2P57739 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN2P57739 AL163051.1-201ENST00000569214 1512 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN2P57739 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN2P57739 AC120498.9-201ENST00000339021 3867 ntBASIC18.23■□□□□ 0.51
CLDN2P57739 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
CLDN2P57739 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms