Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.7■□□□□ 0.58
WNT3AP56704 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
WNT3AP56704 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
WNT3AP56704 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
WNT3AP56704 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
WNT3AP56704 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.69■□□□□ 0.58
WNT3AP56704 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.69■□□□□ 0.58
WNT3AP56704 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WNT3AP56704 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WNT3AP56704 ECEL1P3-201ENST00000427961 737 ntBASIC18.69■□□□□ 0.58
WNT3AP56704 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.69■□□□□ 0.58
WNT3AP56704 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.69■□□□□ 0.58
WNT3AP56704 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.69■□□□□ 0.58
WNT3AP56704 AC012306.2-201ENST00000609350 630 ntBASIC18.69■□□□□ 0.58
WNT3AP56704 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
WNT3AP56704 AC097493.4-201ENST00000641197 219 ntBASIC18.69■□□□□ 0.58
WNT3AP56704 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.69■□□□□ 0.58
WNT3AP56704 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WNT3AP56704 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
WNT3AP56704 AC099343.3-201ENST00000605834 2503 ntBASIC18.69■□□□□ 0.58
WNT3AP56704 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WNT3AP56704 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
WNT3AP56704 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
WNT3AP56704 AL163051.1-201ENST00000569214 1512 ntBASIC18.69■□□□□ 0.58
WNT3AP56704 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WNT3AP56704 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
WNT3AP56704 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
WNT3AP56704 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 BICD1-207ENST00000551848 1962 ntBASIC18.68■□□□□ 0.58
WNT3AP56704 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 AC135050.7-201ENST00000624508 2218 ntBASIC18.68■□□□□ 0.58
WNT3AP56704 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.68■□□□□ 0.58
WNT3AP56704 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 SLC25A3P1-201ENST00000443844 931 ntBASIC18.68■□□□□ 0.58
WNT3AP56704 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
WNT3AP56704 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.68■□□□□ 0.58
WNT3AP56704 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.68■□□□□ 0.58
WNT3AP56704 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
WNT3AP56704 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms