Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDH8P55286 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 AC104581.1-202ENST00000635932 2618 ntBASIC19.74■□□□□ 0.75
CDH8P55286 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH8P55286 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH8P55286 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH8P55286 KRT18P35-201ENST00000510488 1269 ntBASIC19.74■□□□□ 0.75
CDH8P55286 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH8P55286 AC079602.3-201ENST00000623931 403 ntBASIC19.74■□□□□ 0.75
CDH8P55286 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH8P55286 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH8P55286 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.73■□□□□ 0.75
CDH8P55286 AC112907.2-201ENST00000448639 330 ntBASIC19.73■□□□□ 0.75
CDH8P55286 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH8P55286 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH8P55286 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 AL445228.2-201ENST00000605589 952 ntBASIC19.73■□□□□ 0.75
CDH8P55286 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH8P55286 AL590326.2-201ENST00000625139 305 ntBASIC19.73■□□□□ 0.75
CDH8P55286 MYC-208ENST00000641036 567 ntBASIC19.73■□□□□ 0.75
CDH8P55286 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CDH8P55286 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CDH8P55286 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH8P55286 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH8P55286 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH8P55286 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH8P55286 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH8P55286 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.72■□□□□ 0.75
CDH8P55286 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH8P55286 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH8P55286 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH8P55286 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 AC034232.1-201ENST00000506026 1064 ntBASIC19.72■□□□□ 0.75
CDH8P55286 HYMAI.1-201ENST00000620949 238 ntBASIC19.72■□□□□ 0.75
CDH8P55286 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
CDH8P55286 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDH8P55286 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH8P55286 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDH8P55286 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH8P55286 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.71■□□□□ 0.75
CDH8P55286 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH8P55286 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH8P55286 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH8P55286 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDH8P55286 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH8P55286 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH8P55286 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH8P55286 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms