Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 KRT8P50-201ENST00000562022 1438 ntBASIC16.46■□□□□ 0.23
SLC25A1P53007 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC25A1P53007 NUDT16P1-203ENST00000513809 620 ntBASIC16.46■□□□□ 0.23
SLC25A1P53007 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SLC25A1P53007 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC25A1P53007 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC25A1P53007 GMCL1P1-201ENST00000463439 1581 ntBASIC16.46■□□□□ 0.23
SLC25A1P53007 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC25A1P53007 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC25A1P53007 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC25A1P53007 BCL2-203ENST00000589955 5011 ntBASIC16.45■□□□□ 0.22
SLC25A1P53007 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC25A1P53007 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 HCG11-201ENST00000411553 5696 ntBASIC16.45■□□□□ 0.22
SLC25A1P53007 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 SLC25A1P4-201ENST00000567977 778 ntBASIC16.45■□□□□ 0.22
SLC25A1P53007 ITM2C-210ENST00000620962 501 ntBASIC16.45■□□□□ 0.22
SLC25A1P53007 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SLC25A1P53007 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC25A1P53007 AC067852.2-201ENST00000590513 2313 ntBASIC16.45■□□□□ 0.22
SLC25A1P53007 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC25A1P53007 GNAS-203ENST00000306120 1878 ntBASIC16.44■□□□□ 0.22
SLC25A1P53007 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC25A1P53007 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 FAM201B-201ENST00000458407 597 ntBASIC16.44■□□□□ 0.22
SLC25A1P53007 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC25A1P53007 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC25A1P53007 MIR3180-5-201ENST00000583743 153 ntBASIC16.44■□□□□ 0.22
SLC25A1P53007 REXO1L9P-201ENST00000604264 2108 ntBASIC16.44■□□□□ 0.22
SLC25A1P53007 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SLC25A1P53007 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC25A1P53007 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC25A1P53007 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC25A1P53007 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC25A1P53007 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC25A1P53007 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 AC097488.1-201ENST00000507834 756 ntBASIC16.43■□□□□ 0.22
SLC25A1P53007 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC25A1P53007 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC25A1P53007 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SLC25A1P53007 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms