Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP000593.1-201ENST00000393668 712 ntBASIC16.11■□□□□ 0.17
HCFC1P51610 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.11■□□□□ 0.17
HCFC1P51610 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
HCFC1P51610 BNIP3P18-201ENST00000593976 575 ntBASIC16.11■□□□□ 0.17
HCFC1P51610 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HCFC1P51610 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1P51610 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HCFC1P51610 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1P51610 KRT18P41-201ENST00000518924 1277 ntBASIC16.11■□□□□ 0.17
HCFC1P51610 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1P51610 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1P51610 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.11■□□□□ 0.17
HCFC1P51610 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 MTMR9LP-203ENST00000426597 1545 ntBASIC16.1■□□□□ 0.17
HCFC1P51610 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 PMS2P1-201ENST00000431037 1228 ntBASIC16.1■□□□□ 0.17
HCFC1P51610 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HCFC1P51610 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC1P51610 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1P51610 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC1P51610 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC1P51610 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.09■□□□□ 0.17
HCFC1P51610 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.09■□□□□ 0.17
HCFC1P51610 LINC01711-201ENST00000598340 967 ntBASIC16.09■□□□□ 0.17
HCFC1P51610 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.09■□□□□ 0.17
HCFC1P51610 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 AL353692.3-201ENST00000407031 1396 ntBASIC16.09■□□□□ 0.17
HCFC1P51610 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.09■□□□□ 0.17
HCFC1P51610 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC1P51610 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 AC018712.1-201ENST00000455767 687 ntBASIC16.09■□□□□ 0.17
HCFC1P51610 KRT18P58-201ENST00000527480 1120 ntBASIC16.09■□□□□ 0.17
HCFC1P51610 MIR3180-4-201ENST00000582223 153 ntBASIC16.09■□□□□ 0.17
HCFC1P51610 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HCFC1P51610 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1P51610 AC243591.1-201ENST00000452967 1364 ntBASIC16.08■□□□□ 0.17
HCFC1P51610 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1P51610 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
HCFC1P51610 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1P51610 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1P51610 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC1P51610 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
HCFC1P51610 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HCFC1P51610 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms