Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SSR1P43307 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 AC018470.1-201ENST00000624790 3129 ntBASIC19.69■□□□□ 0.74
SSR1P43307 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
SSR1P43307 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.69■□□□□ 0.74
SSR1P43307 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSR1P43307 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.69■□□□□ 0.74
SSR1P43307 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.69■□□□□ 0.74
SSR1P43307 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 AC098590.1-201ENST00000468126 897 ntBASIC19.69■□□□□ 0.74
SSR1P43307 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.69■□□□□ 0.74
SSR1P43307 CKBP1-201ENST00000565489 1086 ntBASIC19.69■□□□□ 0.74
SSR1P43307 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.69■□□□□ 0.74
SSR1P43307 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SSR1P43307 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSR1P43307 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.69■□□□□ 0.74
SSR1P43307 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR1P43307 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
SSR1P43307 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 FSCN1P1-201ENST00000568912 1481 ntBASIC19.68■□□□□ 0.74
SSR1P43307 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.68■□□□□ 0.74
SSR1P43307 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.68■□□□□ 0.74
SSR1P43307 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SSR1P43307 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.68■□□□□ 0.74
SSR1P43307 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR1P43307 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSR1P43307 KRT8P3-201ENST00000519669 1449 ntBASIC19.68■□□□□ 0.74
SSR1P43307 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 UBE2SP1-201ENST00000450587 669 ntBASIC19.67■□□□□ 0.74
SSR1P43307 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.67■□□□□ 0.74
SSR1P43307 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 AC068587.9-201ENST00000641814 219 ntBASIC19.67■□□□□ 0.74
SSR1P43307 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 AL499627.1-201ENST00000569373 2188 ntBASIC19.67■□□□□ 0.74
SSR1P43307 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR1P43307 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR1P43307 CROCCP1-201ENST00000426910 5675 ntBASIC19.67■□□□□ 0.74
SSR1P43307 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.67■□□□□ 0.74
SSR1P43307 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms