Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC1A1P43005 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
SLC1A1P43005 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SLC1A1P43005 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SLC1A1P43005 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 CRYGFP-201ENST00000418459 633 ntBASIC19.39■□□□□ 0.69
SLC1A1P43005 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 AP005242.2-201ENST00000580065 1175 ntBASIC19.39■□□□□ 0.69
SLC1A1P43005 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SLC1A1P43005 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC1A1P43005 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC1A1P43005 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC1A1P43005 AC008764.6-201ENST00000595909 2069 ntBASIC19.39■□□□□ 0.69
SLC1A1P43005 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC1A1P43005 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC1A1P43005 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 SLC25A6P5-201ENST00000435663 894 ntBASIC19.38■□□□□ 0.69
SLC1A1P43005 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC1A1P43005 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC1A1P43005 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
SLC1A1P43005 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC1A1P43005 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A1P43005 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC1A1P43005 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC1A1P43005 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC1A1P43005 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC1A1P43005 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
SLC1A1P43005 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC1A1P43005 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC1A1P43005 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A1P43005 AC138028.4-201ENST00000564984 1845 ntBASIC19.37■□□□□ 0.69
SLC1A1P43005 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC1A1P43005 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC1A1P43005 GMCL1P1-201ENST00000463439 1581 ntBASIC19.36■□□□□ 0.69
SLC1A1P43005 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
SLC1A1P43005 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC1A1P43005 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC1A1P43005 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC1A1P43005 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms