Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT9P35527 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT9P35527 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT9P35527 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 AC004951.3-201ENST00000418645 1148 ntBASIC20.28■□□□□ 0.84
KRT9P35527 FAM197Y1-201ENST00000421178 764 ntBASIC20.28■□□□□ 0.84
KRT9P35527 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KRT9P35527 AC026271.3-201ENST00000571884 352 ntBASIC20.28■□□□□ 0.84
KRT9P35527 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 MYC-208ENST00000641036 567 ntBASIC20.28■□□□□ 0.84
KRT9P35527 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT9P35527 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT9P35527 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT9P35527 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KRT9P35527 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT9P35527 RPS2P55-201ENST00000397318 883 ntBASIC20.27■□□□□ 0.84
KRT9P35527 AC091390.4-202ENST00000476426 537 ntBASIC20.27■□□□□ 0.84
KRT9P35527 AC107956.1-201ENST00000494359 873 ntBASIC20.27■□□□□ 0.84
KRT9P35527 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
KRT9P35527 CD177P1-201ENST00000606252 935 ntBASIC20.27■□□□□ 0.84
KRT9P35527 AP001412.1-201ENST00000608405 714 ntBASIC20.27■□□□□ 0.84
KRT9P35527 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT9P35527 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT9P35527 FZD10-202ENST00000539839 3282 ntBASIC20.27■□□□□ 0.84
KRT9P35527 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT9P35527 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.27■□□□□ 0.83
KRT9P35527 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
KRT9P35527 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
KRT9P35527 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT9P35527 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT9P35527 AC112777.1-201ENST00000540175 1423 ntBASIC20.27■□□□□ 0.83
KRT9P35527 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.27■□□□□ 0.83
KRT9P35527 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT9P35527 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT9P35527 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT9P35527 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KRT9P35527 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.26■□□□□ 0.83
KRT9P35527 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT9P35527 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT9P35527 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT9P35527 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT9P35527 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
KRT9P35527 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT9P35527 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT9P35527 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT9P35527 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KRT9P35527 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT9P35527 HTR7P1-202ENST00000624664 4411 ntBASIC20.25■□□□□ 0.83
KRT9P35527 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT9P35527 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT9P35527 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT9P35527 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 PRSS44-201ENST00000515154 1146 ntBASIC20.25■□□□□ 0.83
KRT9P35527 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT9P35527 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT9P35527 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
KRT9P35527 AC011298.2-201ENST00000617989 482 ntBASIC20.25■□□□□ 0.83
KRT9P35527 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT9P35527 KRT8P45-201ENST00000414328 1447 ntBASIC20.25■□□□□ 0.83
KRT9P35527 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT9P35527 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT9P35527 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT9P35527 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms