Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A4P31645 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
SLC6A4P31645 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A4P31645 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A4P31645 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A4P31645 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A4P31645 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A4P31645 RNF126P1-202ENST00000569893 925 ntBASIC18.97■□□□□ 0.63
SLC6A4P31645 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A4P31645 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SLC6A4P31645 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A4P31645 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A4P31645 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A4P31645 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A4P31645 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 SDHAP2-201ENST00000455183 2001 ntBASIC18.96■□□□□ 0.63
SLC6A4P31645 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SLC6A4P31645 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 MIR149-201ENST00000384879 89 ntBASIC18.96■□□□□ 0.63
SLC6A4P31645 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A4P31645 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 AC009065.1-201ENST00000564055 1225 ntBASIC18.96■□□□□ 0.63
SLC6A4P31645 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A4P31645 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SLC6A4P31645 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.96■□□□□ 0.63
SLC6A4P31645 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 AC087289.5-201ENST00000586076 3175 ntBASIC18.96■□□□□ 0.63
SLC6A4P31645 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
SLC6A4P31645 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A4P31645 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A4P31645 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SLC6A4P31645 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC6A4P31645 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SLC6A4P31645 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC6A4P31645 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC6A4P31645 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC6A4P31645 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC6A4P31645 AC011498.5-201ENST00000592027 486 ntBASIC18.95■□□□□ 0.62
SLC6A4P31645 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLC6A4P31645 AC009102.3-201ENST00000623118 1491 ntBASIC18.95■□□□□ 0.62
SLC6A4P31645 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A4P31645 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC6A4P31645 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC6A4P31645 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SLC6A4P31645 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A4P31645 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms