Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HOMER2P1-201ENST00000455653 964 ntBASIC17.06■□□□□ 0.32
ABCD3P28288 AC092647.4-201ENST00000457211 535 ntBASIC17.06■□□□□ 0.32
ABCD3P28288 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ABCD3P28288 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.06■□□□□ 0.32
ABCD3P28288 AC022616.7-201ENST00000525383 220 ntBASIC17.06■□□□□ 0.32
ABCD3P28288 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.06■□□□□ 0.32
ABCD3P28288 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ABCD3P28288 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ABCD3P28288 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ABCD3P28288 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ABCD3P28288 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.06■□□□□ 0.32
ABCD3P28288 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.06■□□□□ 0.32
ABCD3P28288 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ABCD3P28288 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.05■□□□□ 0.32
ABCD3P28288 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 LINC01238-205ENST00000567549 1107 ntBASIC17.05■□□□□ 0.32
ABCD3P28288 MIR3917-201ENST00000580971 93 ntBASIC17.05■□□□□ 0.32
ABCD3P28288 MIR3180-4-201ENST00000582223 153 ntBASIC17.05■□□□□ 0.32
ABCD3P28288 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ABCD3P28288 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ABCD3P28288 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ABCD3P28288 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ABCD3P28288 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.04■□□□□ 0.32
ABCD3P28288 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
ABCD3P28288 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.04■□□□□ 0.32
ABCD3P28288 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ABCD3P28288 STARP1-201ENST00000397973 869 ntBASIC17.04■□□□□ 0.32
ABCD3P28288 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.04■□□□□ 0.32
ABCD3P28288 FAM8A6P-201ENST00000407496 1135 ntBASIC17.04■□□□□ 0.32
ABCD3P28288 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.04■□□□□ 0.32
ABCD3P28288 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.04■□□□□ 0.32
ABCD3P28288 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ABCD3P28288 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ABCD3P28288 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 AL163051.1-201ENST00000569214 1512 ntBASIC17.04■□□□□ 0.32
ABCD3P28288 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ABCD3P28288 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ABCD3P28288 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ABCD3P28288 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 RASA4DP-201ENST00000460726 1199 ntBASIC17.03■□□□□ 0.32
ABCD3P28288 AL359075.1-203ENST00000462729 1002 ntBASIC17.03■□□□□ 0.32
ABCD3P28288 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.03■□□□□ 0.32
ABCD3P28288 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.03■□□□□ 0.32
ABCD3P28288 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.03■□□□□ 0.32
ABCD3P28288 AC009065.1-201ENST00000564055 1225 ntBASIC17.03■□□□□ 0.32
ABCD3P28288 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.03■□□□□ 0.32
ABCD3P28288 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.03■□□□□ 0.32
ABCD3P28288 AC126763.1-201ENST00000552015 2118 ntBASIC17.03■□□□□ 0.32
ABCD3P28288 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ABCD3P28288 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCD3P28288 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms