Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CD40P25942 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.95■□□□□ 0.14
CD40P25942 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CD40P25942 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 HCG4P8-203ENST00000443049 980 ntBASIC15.95■□□□□ 0.14
CD40P25942 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
CD40P25942 BX276092.5-203ENST00000456199 560 ntBASIC15.95■□□□□ 0.14
CD40P25942 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 KRT18P56-201ENST00000507275 550 ntBASIC15.95■□□□□ 0.14
CD40P25942 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
CD40P25942 AL121672.3-201ENST00000608644 468 ntBASIC15.95■□□□□ 0.14
CD40P25942 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.95■□□□□ 0.14
CD40P25942 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.95■□□□□ 0.14
CD40P25942 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.95■□□□□ 0.14
CD40P25942 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CD40P25942 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.95■□□□□ 0.14
CD40P25942 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD40P25942 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD40P25942 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 AL163051.1-201ENST00000569214 1512 ntBASIC15.94■□□□□ 0.14
CD40P25942 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 ATP5G2P1-201ENST00000433580 426 ntBASIC15.94■□□□□ 0.14
CD40P25942 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.94■□□□□ 0.14
CD40P25942 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.94■□□□□ 0.14
CD40P25942 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.94■□□□□ 0.14
CD40P25942 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.94■□□□□ 0.14
CD40P25942 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.94■□□□□ 0.14
CD40P25942 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.94■□□□□ 0.14
CD40P25942 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD40P25942 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CD40P25942 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.93■□□□□ 0.14
CD40P25942 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.93■□□□□ 0.14
CD40P25942 TSSC2-201ENST00000450217 709 ntBASIC15.93■□□□□ 0.14
CD40P25942 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.93■□□□□ 0.14
CD40P25942 KRT8P26-201ENST00000534154 1276 ntBASIC15.93■□□□□ 0.14
CD40P25942 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.93■□□□□ 0.14
CD40P25942 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms