Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PRORSD1P-202ENST00000563365 2154 ntBASIC17.15■□□□□ 0.34
PRKCAP17252 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 CA15P1-201ENST00000481698 905 ntBASIC17.15■□□□□ 0.34
PRKCAP17252 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PRKCAP17252 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKCAP17252 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PRKCAP17252 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.15■□□□□ 0.34
PRKCAP17252 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKCAP17252 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.15■□□□□ 0.34
PRKCAP17252 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.15■□□□□ 0.34
PRKCAP17252 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRKCAP17252 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PRKCAP17252 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
PRKCAP17252 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
PRKCAP17252 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRKCAP17252 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.14■□□□□ 0.33
PRKCAP17252 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRKCAP17252 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 MMP23A-201ENST00000234610 1017 ntBASIC17.13■□□□□ 0.33
PRKCAP17252 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRKCAP17252 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.13■□□□□ 0.33
PRKCAP17252 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.13■□□□□ 0.33
PRKCAP17252 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.13■□□□□ 0.33
PRKCAP17252 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 CROCCP3-202ENST00000420820 1947 ntBASIC17.13■□□□□ 0.33
PRKCAP17252 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.13■□□□□ 0.33
PRKCAP17252 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRKCAP17252 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRKCAP17252 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.12■□□□□ 0.33
PRKCAP17252 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.12■□□□□ 0.33
PRKCAP17252 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.12■□□□□ 0.33
PRKCAP17252 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRKCAP17252 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms