Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RARAP10276 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RARAP10276 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.45■□□□□ 0.7
RARAP10276 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RARAP10276 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.45■□□□□ 0.7
RARAP10276 AP000525.1-201ENST00000608286 694 ntBASIC19.45■□□□□ 0.7
RARAP10276 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RARAP10276 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RARAP10276 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RARAP10276 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RARAP10276 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.44■□□□□ 0.7
RARAP10276 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RARAP10276 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.44■□□□□ 0.7
RARAP10276 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 AL355075.4-201ENST00000554988 638 ntBASIC19.44■□□□□ 0.7
RARAP10276 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.44■□□□□ 0.7
RARAP10276 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.44■□□□□ 0.7
RARAP10276 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RARAP10276 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 AC135776.1-201ENST00000319817 2481 ntBASIC19.44■□□□□ 0.7
RARAP10276 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RARAP10276 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.44■□□□□ 0.7
RARAP10276 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RARAP10276 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.43■□□□□ 0.7
RARAP10276 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.43■□□□□ 0.7
RARAP10276 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RARAP10276 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
RARAP10276 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.43■□□□□ 0.7
RARAP10276 AL390955.1-201ENST00000428694 934 ntBASIC19.43■□□□□ 0.7
RARAP10276 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.43■□□□□ 0.7
RARAP10276 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.43■□□□□ 0.7
RARAP10276 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.43■□□□□ 0.7
RARAP10276 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.43■□□□□ 0.7
RARAP10276 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RARAP10276 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.42■□□□□ 0.7
RARAP10276 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RARAP10276 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
RARAP10276 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RARAP10276 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.42■□□□□ 0.7
RARAP10276 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.42■□□□□ 0.7
RARAP10276 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.42■□□□□ 0.7
RARAP10276 FITM1-202ENST00000559294 800 ntBASIC19.42■□□□□ 0.7
RARAP10276 MIR4674-201ENST00000582457 87 ntBASIC19.42■□□□□ 0.7
RARAP10276 MIR4497-201ENST00000583208 89 ntBASIC19.42■□□□□ 0.7
RARAP10276 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARAP10276 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
RARAP10276 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms