Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CYP3A4P08684 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.78■□□□□ 0.92
CYP3A4P08684 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.78■□□□□ 0.92
CYP3A4P08684 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.78■□□□□ 0.92
CYP3A4P08684 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.78■□□□□ 0.92
CYP3A4P08684 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.78■□□□□ 0.92
CYP3A4P08684 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CYP3A4P08684 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 AC005082.1-201ENST00000413042 2259 ntBASIC20.78■□□□□ 0.92
CYP3A4P08684 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYP3A4P08684 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CYP3A4P08684 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.77■□□□□ 0.92
CYP3A4P08684 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.77■□□□□ 0.92
CYP3A4P08684 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.77■□□□□ 0.92
CYP3A4P08684 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.77■□□□□ 0.92
CYP3A4P08684 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.77■□□□□ 0.92
CYP3A4P08684 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYP3A4P08684 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.77■□□□□ 0.92
CYP3A4P08684 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CYP3A4P08684 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.77■□□□□ 0.91
CYP3A4P08684 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 IGHGP-201ENST00000390555 1178 ntBASIC20.76■□□□□ 0.91
CYP3A4P08684 AP003733.1-201ENST00000491725 852 ntBASIC20.76■□□□□ 0.91
CYP3A4P08684 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CYP3A4P08684 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP3A4P08684 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP3A4P08684 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.75■□□□□ 0.91
CYP3A4P08684 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC113404.2-201ENST00000507884 177 ntBASIC20.75■□□□□ 0.91
CYP3A4P08684 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 AC005332.3-201ENST00000589904 676 ntBASIC20.75■□□□□ 0.91
CYP3A4P08684 AC008687.5-201ENST00000593746 558 ntBASIC20.75■□□□□ 0.91
CYP3A4P08684 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.75■□□□□ 0.91
CYP3A4P08684 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CYP3A4P08684 WIZP1-201ENST00000531444 2299 ntBASIC20.75■□□□□ 0.91
CYP3A4P08684 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP3A4P08684 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP3A4P08684 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms