Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 FAM207BP-201ENST00000447172 505 ntBASIC18.24■□□□□ 0.51
CAPN1P07384 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 AC010203.1-204ENST00000548782 407 ntBASIC18.24■□□□□ 0.51
CAPN1P07384 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 AL390961.4-201ENST00000623958 2535 ntBASIC18.24■□□□□ 0.51
CAPN1P07384 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.24■□□□□ 0.51
CAPN1P07384 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 AC090340.1-201ENST00000620778 4980 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 MFAP1P1-201ENST00000442257 1255 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 KRT18P35-201ENST00000510488 1269 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 PRSS44-201ENST00000515154 1146 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN1P07384 FAM87A-204ENST00000613235 858 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CAPN1P07384 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 AC126763.1-201ENST00000552015 2118 ntBASIC18.23■□□□□ 0.51
CAPN1P07384 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN1P07384 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN1P07384 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN1P07384 BICD1-207ENST00000551848 1962 ntBASIC18.22■□□□□ 0.51
CAPN1P07384 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CAPN1P07384 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CAPN1P07384 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CAPN1P07384 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 AC104076.2-201ENST00000448912 469 ntBASIC18.22■□□□□ 0.51
CAPN1P07384 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 AL049597.2-201ENST00000565575 961 ntBASIC18.22■□□□□ 0.51
CAPN1P07384 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CAPN1P07384 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN1P07384 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.21■□□□□ 0.51
CAPN1P07384 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN1P07384 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms