Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.49■□□□□ 0.39
CLPTM1O96005 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.49■□□□□ 0.39
CLPTM1O96005 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.49■□□□□ 0.39
CLPTM1O96005 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.48■□□□□ 0.39
CLPTM1O96005 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLPTM1O96005 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLPTM1O96005 AC073210.2-201ENST00000430369 194 ntBASIC17.48■□□□□ 0.39
CLPTM1O96005 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 AC105020.6-201ENST00000621523 1217 ntBASIC17.48■□□□□ 0.39
CLPTM1O96005 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLPTM1O96005 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLPTM1O96005 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.48■□□□□ 0.39
CLPTM1O96005 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CLPTM1O96005 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLPTM1O96005 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 AC091874.3-201ENST00000512672 1195 ntBASIC17.47■□□□□ 0.39
CLPTM1O96005 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 AC083906.6-201ENST00000641366 219 ntBASIC17.47■□□□□ 0.39
CLPTM1O96005 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLPTM1O96005 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPTM1O96005 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPTM1O96005 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.46■□□□□ 0.39
CLPTM1O96005 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLPTM1O96005 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPTM1O96005 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLPTM1O96005 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.39
CLPTM1O96005 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.46■□□□□ 0.39
CLPTM1O96005 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms