Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.68■□□□□ 0.74
LCA5LO95447 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.68■□□□□ 0.74
LCA5LO95447 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.68■□□□□ 0.74
LCA5LO95447 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.68■□□□□ 0.74
LCA5LO95447 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 FSCN1P1-201ENST00000568912 1481 ntBASIC19.67■□□□□ 0.74
LCA5LO95447 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 AC006116.8-202ENST00000587620 1550 ntBASIC19.67■□□□□ 0.74
LCA5LO95447 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.67■□□□□ 0.74
LCA5LO95447 MCCD1P1-208ENST00000445732 328 ntBASIC19.67■□□□□ 0.74
LCA5LO95447 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.67■□□□□ 0.74
LCA5LO95447 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 SDHAP2-201ENST00000455183 2001 ntBASIC19.67■□□□□ 0.74
LCA5LO95447 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
LCA5LO95447 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCA5LO95447 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.67■□□□□ 0.74
LCA5LO95447 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.66■□□□□ 0.74
LCA5LO95447 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.66■□□□□ 0.74
LCA5LO95447 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
LCA5LO95447 AC006058.3-201ENST00000606217 1069 ntBASIC19.66■□□□□ 0.74
LCA5LO95447 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.66■□□□□ 0.74
LCA5LO95447 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCA5LO95447 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LCA5LO95447 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
LCA5LO95447 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.65■□□□□ 0.74
LCA5LO95447 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LCA5LO95447 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LCA5LO95447 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
LCA5LO95447 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCA5LO95447 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LCA5LO95447 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms