Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
SOX30O94993 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX30O94993 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX30O94993 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX30O94993 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX30O94993 LINC01023-201ENST00000606054 436 ntBASIC17.25■□□□□ 0.35
SOX30O94993 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX30O94993 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SOX30O94993 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SOX30O94993 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX30O94993 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX30O94993 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SOX30O94993 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
SOX30O94993 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 MIR1224-201ENST00000408193 85 ntBASIC17.24■□□□□ 0.35
SOX30O94993 MIR1238-201ENST00000408483 83 ntBASIC17.24■□□□□ 0.35
SOX30O94993 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX30O94993 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 AP003041.3-201ENST00000527151 707 ntBASIC17.24■□□□□ 0.35
SOX30O94993 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 AP000525.1-201ENST00000608286 694 ntBASIC17.24■□□□□ 0.35
SOX30O94993 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX30O94993 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SOX30O94993 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SOX30O94993 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SOX30O94993 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.23■□□□□ 0.35
SOX30O94993 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.23■□□□□ 0.35
SOX30O94993 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SOX30O94993 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 AC007663.1-201ENST00000438948 1240 ntBASIC17.23■□□□□ 0.35
SOX30O94993 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 AL355075.4-201ENST00000554988 638 ntBASIC17.23■□□□□ 0.35
SOX30O94993 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX30O94993 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.23■□□□□ 0.35
SOX30O94993 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.23■□□□□ 0.35
SOX30O94993 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SOX30O94993 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SOX30O94993 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX30O94993 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX30O94993 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX30O94993 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX30O94993 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX30O94993 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX30O94993 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SOX30O94993 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX30O94993 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX30O94993 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms