Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST1O76090 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BEST1O76090 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
BEST1O76090 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BEST1O76090 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST1O76090 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BEST1O76090 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BEST1O76090 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.4■□□□□ 0.7
BEST1O76090 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.4■□□□□ 0.7
BEST1O76090 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
BEST1O76090 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
BEST1O76090 WIZP1-201ENST00000531444 2299 ntBASIC19.4■□□□□ 0.7
BEST1O76090 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
BEST1O76090 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST1O76090 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST1O76090 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST1O76090 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
BEST1O76090 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST1O76090 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
BEST1O76090 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 MIR662-201ENST00000384847 95 ntBASIC19.39■□□□□ 0.69
BEST1O76090 MIR149-201ENST00000384879 89 ntBASIC19.39■□□□□ 0.69
BEST1O76090 AL645929.1-201ENST00000420084 975 ntBASIC19.39■□□□□ 0.69
BEST1O76090 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.39■□□□□ 0.69
BEST1O76090 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.39■□□□□ 0.69
BEST1O76090 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.39■□□□□ 0.69
BEST1O76090 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.39■□□□□ 0.69
BEST1O76090 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 AP000550.4-202ENST00000639755 178 ntBASIC19.39■□□□□ 0.69
BEST1O76090 IER3-202ENST00000376377 1350 ntBASIC19.39■□□□□ 0.69
BEST1O76090 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 AC009102.3-201ENST00000623118 1491 ntBASIC19.39■□□□□ 0.69
BEST1O76090 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 AL162741.1-201ENST00000565563 1558 ntBASIC19.39■□□□□ 0.69
BEST1O76090 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST1O76090 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST1O76090 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
BEST1O76090 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.38■□□□□ 0.69
BEST1O76090 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
BEST1O76090 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.38■□□□□ 0.69
BEST1O76090 RNF126P1-202ENST00000569893 925 ntBASIC19.38■□□□□ 0.69
BEST1O76090 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.38■□□□□ 0.69
BEST1O76090 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.38■□□□□ 0.69
BEST1O76090 AC091076.1-201ENST00000610741 619 ntBASIC19.38■□□□□ 0.69
BEST1O76090 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
BEST1O76090 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.38■□□□□ 0.69
BEST1O76090 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
BEST1O76090 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST1O76090 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms