Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFS3O75489 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFS3O75489 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFS3O75489 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFS3O75489 AC092338.2-201ENST00000568827 1415 ntBASIC18.48■□□□□ 0.55
NDUFS3O75489 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFS3O75489 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.47■□□□□ 0.55
NDUFS3O75489 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
NDUFS3O75489 MYLKP1-201ENST00000509077 1580 ntBASIC18.47■□□□□ 0.55
NDUFS3O75489 AC036111.1-201ENST00000533973 1582 ntBASIC18.47■□□□□ 0.55
NDUFS3O75489 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
NDUFS3O75489 KRT18P41-201ENST00000518924 1277 ntBASIC18.47■□□□□ 0.55
NDUFS3O75489 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.47■□□□□ 0.55
NDUFS3O75489 EGLN1P1-201ENST00000531623 762 ntBASIC18.47■□□□□ 0.55
NDUFS3O75489 NAPSB-206ENST00000562112 1266 ntBASIC18.47■□□□□ 0.55
NDUFS3O75489 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.47■□□□□ 0.55
NDUFS3O75489 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.47■□□□□ 0.55
NDUFS3O75489 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NDUFS3O75489 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
NDUFS3O75489 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFS3O75489 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.46■□□□□ 0.55
NDUFS3O75489 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFS3O75489 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFS3O75489 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NDUFS3O75489 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NDUFS3O75489 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 TSPY14P-201ENST00000303979 915 ntBASIC18.46■□□□□ 0.55
NDUFS3O75489 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.46■□□□□ 0.55
NDUFS3O75489 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.46■□□□□ 0.55
NDUFS3O75489 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.46■□□□□ 0.55
NDUFS3O75489 AC007663.1-201ENST00000438948 1240 ntBASIC18.46■□□□□ 0.55
NDUFS3O75489 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.46■□□□□ 0.55
NDUFS3O75489 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NDUFS3O75489 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFS3O75489 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFS3O75489 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
NDUFS3O75489 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NDUFS3O75489 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NDUFS3O75489 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NDUFS3O75489 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NDUFS3O75489 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 AP000593.1-201ENST00000393668 712 ntBASIC18.45■□□□□ 0.54
NDUFS3O75489 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NDUFS3O75489 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.45■□□□□ 0.54
NDUFS3O75489 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 AC128688.1-201ENST00000487626 519 ntBASIC18.45■□□□□ 0.54
NDUFS3O75489 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.45■□□□□ 0.54
NDUFS3O75489 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.45■□□□□ 0.54
NDUFS3O75489 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 KRT8P9-201ENST00000558927 1449 ntBASIC18.45■□□□□ 0.54
NDUFS3O75489 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NDUFS3O75489 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NDUFS3O75489 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.45■□□□□ 0.54
NDUFS3O75489 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NDUFS3O75489 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFS3O75489 CYP2D8P-201ENST00000433633 1490 ntBASIC18.45■□□□□ 0.54
NDUFS3O75489 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.45■□□□□ 0.54
NDUFS3O75489 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms