Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
LRCH4O75427 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRCH4O75427 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.27■□□□□ 0.68
LRCH4O75427 ECEL1P2-202ENST00000465689 757 ntBASIC19.27■□□□□ 0.68
LRCH4O75427 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH4O75427 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH4O75427 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH4O75427 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRCH4O75427 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH4O75427 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH4O75427 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.27■□□□□ 0.67
LRCH4O75427 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH4O75427 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH4O75427 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH4O75427 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.27■□□□□ 0.67
LRCH4O75427 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.27■□□□□ 0.67
LRCH4O75427 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LRCH4O75427 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH4O75427 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LRCH4O75427 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
LRCH4O75427 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 SDHAP2-201ENST00000455183 2001 ntBASIC19.26■□□□□ 0.67
LRCH4O75427 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.26■□□□□ 0.67
LRCH4O75427 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 NOC2LP1-202ENST00000452600 2235 ntBASIC19.26■□□□□ 0.67
LRCH4O75427 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRCH4O75427 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH4O75427 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.26■□□□□ 0.67
LRCH4O75427 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH4O75427 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH4O75427 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 AC020763.4-201ENST00000623414 4170 ntBASIC19.25■□□□□ 0.67
LRCH4O75427 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRCH4O75427 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
LRCH4O75427 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.25■□□□□ 0.67
LRCH4O75427 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.25■□□□□ 0.67
LRCH4O75427 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH4O75427 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH4O75427 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LRCH4O75427 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRCH4O75427 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH4O75427 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH4O75427 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH4O75427 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH4O75427 AC112497.1-201ENST00000624824 639 ntBASIC19.24■□□□□ 0.67
LRCH4O75427 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH4O75427 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH4O75427 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRCH4O75427 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH4O75427 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
LRCH4O75427 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRCH4O75427 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms