Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXD2O60548 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXD2O60548 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXD2O60548 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXD2O60548 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
FOXD2O60548 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 MIR574-201ENST00000385209 96 ntBASIC18.61■□□□□ 0.57
FOXD2O60548 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXD2O60548 KRT18P58-201ENST00000527480 1120 ntBASIC18.61■□□□□ 0.57
FOXD2O60548 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.61■□□□□ 0.57
FOXD2O60548 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXD2O60548 MIR4674-201ENST00000582457 87 ntBASIC18.61■□□□□ 0.57
FOXD2O60548 AL671883.3-201ENST00000603274 991 ntBASIC18.61■□□□□ 0.57
FOXD2O60548 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXD2O60548 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FOXD2O60548 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXD2O60548 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXD2O60548 AC092720.2-201ENST00000602388 1665 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXD2O60548 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
FOXD2O60548 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXD2O60548 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXD2O60548 MRPL3P1-201ENST00000400109 1033 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 AC092183.1-201ENST00000469884 875 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXD2O60548 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXD2O60548 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXD2O60548 AP001005.1-201ENST00000571755 1248 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 AL136038.4-201ENST00000603606 1261 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 AC024243.1-201ENST00000609234 778 ntBASIC18.6■□□□□ 0.57
FOXD2O60548 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXD2O60548 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXD2O60548 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
FOXD2O60548 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXD2O60548 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
FOXD2O60548 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FOXD2O60548 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXD2O60548 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
FOXD2O60548 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXD2O60548 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXD2O60548 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXD2O60548 AC007225.1-201ENST00000566331 1836 ntBASIC18.59■□□□□ 0.57
FOXD2O60548 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXD2O60548 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXD2O60548 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXD2O60548 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXD2O60548 Z69720.1-201ENST00000601483 472 ntBASIC18.59■□□□□ 0.57
FOXD2O60548 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXD2O60548 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXD2O60548 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXD2O60548 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXD2O60548 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FOXD2O60548 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXD2O60548 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
FOXD2O60548 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.58■□□□□ 0.57
FOXD2O60548 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms