Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2AO43633 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHMP2AO43633 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP2AO43633 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHMP2AO43633 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMP2AO43633 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
CHMP2AO43633 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP2AO43633 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CHMP2AO43633 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP2AO43633 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP2AO43633 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CHMP2AO43633 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 CROCCP3-202ENST00000420820 1947 ntBASIC20.82■□□□□ 0.92
CHMP2AO43633 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2AO43633 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CHMP2AO43633 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.81■□□□□ 0.92
CHMP2AO43633 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.81■□□□□ 0.92
CHMP2AO43633 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 AC079602.3-201ENST00000623931 403 ntBASIC20.81■□□□□ 0.92
CHMP2AO43633 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2AO43633 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP2AO43633 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP2AO43633 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP2AO43633 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP2AO43633 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CHMP2AO43633 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMP2AO43633 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMP2AO43633 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP2AO43633 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP2AO43633 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMP2AO43633 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CHMP2AO43633 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2AO43633 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP2AO43633 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHMP2AO43633 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHMP2AO43633 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP2AO43633 VENTXP5-201ENST00000523979 775 ntBASIC20.79■□□□□ 0.92
CHMP2AO43633 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHMP2AO43633 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP2AO43633 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP2AO43633 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 AL358472.4-201ENST00000633140 710 ntBASIC20.79■□□□□ 0.92
CHMP2AO43633 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHMP2AO43633 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHMP2AO43633 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHMP2AO43633 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2AO43633 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP2AO43633 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP2AO43633 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHMP2AO43633 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP2AO43633 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CHMP2AO43633 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP2AO43633 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms