Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GSC2O15499 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.82■□□□□ 0.44
GSC2O15499 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GSC2O15499 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GSC2O15499 AL357033.4-201ENST00000617703 1807 ntBASIC17.82■□□□□ 0.44
GSC2O15499 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.81■□□□□ 0.44
GSC2O15499 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 AL096828.2-201ENST00000567259 1965 ntBASIC17.81■□□□□ 0.44
GSC2O15499 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.81■□□□□ 0.44
GSC2O15499 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 CYP2T1P-201ENST00000432607 1285 ntBASIC17.81■□□□□ 0.44
GSC2O15499 TUBB8P6-201ENST00000436895 1288 ntBASIC17.81■□□□□ 0.44
GSC2O15499 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GSC2O15499 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.81■□□□□ 0.44
GSC2O15499 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.81■□□□□ 0.44
GSC2O15499 AC008694.1-202ENST00000636953 945 ntBASIC17.81■□□□□ 0.44
GSC2O15499 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.81■□□□□ 0.44
GSC2O15499 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.81■□□□□ 0.44
GSC2O15499 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.81■□□□□ 0.44
GSC2O15499 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GSC2O15499 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GSC2O15499 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GSC2O15499 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
GSC2O15499 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
GSC2O15499 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GSC2O15499 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 RPS2P52-201ENST00000469610 820 ntBASIC17.8■□□□□ 0.44
GSC2O15499 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.8■□□□□ 0.44
GSC2O15499 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.8■□□□□ 0.44
GSC2O15499 KRT8P32-201ENST00000512863 1461 ntBASIC17.8■□□□□ 0.44
GSC2O15499 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.8■□□□□ 0.44
GSC2O15499 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.8■□□□□ 0.44
GSC2O15499 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.8■□□□□ 0.44
GSC2O15499 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GSC2O15499 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GSC2O15499 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
GSC2O15499 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.79■□□□□ 0.44
GSC2O15499 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GSC2O15499 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.79■□□□□ 0.44
GSC2O15499 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.79■□□□□ 0.44
GSC2O15499 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.79■□□□□ 0.44
GSC2O15499 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.79■□□□□ 0.44
GSC2O15499 DUX4L16-201ENST00000555130 1264 ntBASIC17.79■□□□□ 0.44
GSC2O15499 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
GSC2O15499 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.79■□□□□ 0.44
GSC2O15499 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GSC2O15499 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.79■□□□□ 0.44
GSC2O15499 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.78■□□□□ 0.44
GSC2O15499 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.78■□□□□ 0.44
GSC2O15499 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GSC2O15499 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms