Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CLDN5O00501 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN5O00501 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLDN5O00501 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.51■□□□□ 0.71
CLDN5O00501 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN5O00501 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN5O00501 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN5O00501 MIR3180-4-201ENST00000582223 153 ntBASIC19.51■□□□□ 0.71
CLDN5O00501 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN5O00501 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN5O00501 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN5O00501 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLDN5O00501 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN5O00501 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 AC126763.1-201ENST00000552015 2118 ntBASIC19.51■□□□□ 0.71
CLDN5O00501 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN5O00501 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN5O00501 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN5O00501 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN5O00501 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN5O00501 IER3-202ENST00000376377 1350 ntBASIC19.5■□□□□ 0.71
CLDN5O00501 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 PVRIG2P-201ENST00000435460 978 ntBASIC19.5■□□□□ 0.71
CLDN5O00501 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CLDN5O00501 AC116407.4-201ENST00000623319 1061 ntBASIC19.5■□□□□ 0.71
CLDN5O00501 AP000550.4-202ENST00000639755 178 ntBASIC19.5■□□□□ 0.71
CLDN5O00501 AC004408.2-201ENST00000623613 2777 ntBASIC19.5■□□□□ 0.71
CLDN5O00501 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN5O00501 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLDN5O00501 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLDN5O00501 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CLDN5O00501 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLDN5O00501 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN5O00501 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN5O00501 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN5O00501 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN5O00501 AC091076.1-201ENST00000610741 619 ntBASIC19.49■□□□□ 0.71
CLDN5O00501 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN5O00501 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
CLDN5O00501 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN5O00501 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN5O00501 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN5O00501 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN5O00501 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN5O00501 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLDN5O00501 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CLDN5O00501 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN5O00501 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN5O00501 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CLDN5O00501 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN5O00501 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN5O00501 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN5O00501 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN5O00501 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN5O00501 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN5O00501 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN5O00501 AL645929.1-201ENST00000420084 975 ntBASIC19.48■□□□□ 0.71
CLDN5O00501 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN5O00501 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN5O00501 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN5O00501 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN5O00501 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms