Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN3O00409 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
FOXN3O00409 NOC2LP1-202ENST00000452600 2235 ntBASIC19.83■□□□□ 0.77
FOXN3O00409 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN3O00409 MMP23A-201ENST00000234610 1017 ntBASIC19.83■□□□□ 0.77
FOXN3O00409 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN3O00409 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXN3O00409 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN3O00409 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
FOXN3O00409 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN3O00409 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN3O00409 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN3O00409 AC093677.2-201ENST00000600169 1863 ntBASIC19.83■□□□□ 0.76
FOXN3O00409 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXN3O00409 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FOXN3O00409 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN3O00409 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN3O00409 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN3O00409 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXN3O00409 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.82■□□□□ 0.76
FOXN3O00409 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
FOXN3O00409 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN3O00409 AC010653.2-201ENST00000623505 997 ntBASIC19.82■□□□□ 0.76
FOXN3O00409 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN3O00409 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN3O00409 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN3O00409 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN3O00409 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.81■□□□□ 0.76
FOXN3O00409 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 HOXB1-202ENST00000577092 1414 ntBASIC19.81■□□□□ 0.76
FOXN3O00409 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 AL133373.2-201ENST00000623187 2828 ntBASIC19.81■□□□□ 0.76
FOXN3O00409 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
FOXN3O00409 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
FOXN3O00409 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN3O00409 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN3O00409 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 KRT18P23-201ENST00000435622 1283 ntBASIC19.8■□□□□ 0.76
FOXN3O00409 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN3O00409 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN3O00409 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms