Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM1O00151 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM1O00151 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM1O00151 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM1O00151 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDLIM1O00151 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
PDLIM1O00151 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
PDLIM1O00151 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM1O00151 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM1O00151 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PDLIM1O00151 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM1O00151 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM1O00151 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDLIM1O00151 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDLIM1O00151 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDLIM1O00151 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM1O00151 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM1O00151 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM1O00151 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM1O00151 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.64■□□□□ 0.41
PDLIM1O00151 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDLIM1O00151 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM1O00151 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.64■□□□□ 0.41
PDLIM1O00151 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PDLIM1O00151 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM1O00151 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM1O00151 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM1O00151 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM1O00151 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PDLIM1O00151 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM1O00151 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM1O00151 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 AL390719.1-204ENST00000412397 1219 ntBASIC17.63■□□□□ 0.41
PDLIM1O00151 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM1O00151 FAM201B-201ENST00000458407 597 ntBASIC17.63■□□□□ 0.41
PDLIM1O00151 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.63■□□□□ 0.41
PDLIM1O00151 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM1O00151 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.63■□□□□ 0.41
PDLIM1O00151 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM1O00151 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM1O00151 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDLIM1O00151 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM1O00151 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDLIM1O00151 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM1O00151 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM1O00151 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM1O00151 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDLIM1O00151 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM1O00151 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM1O00151 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.62■□□□□ 0.41
PDLIM1O00151 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM1O00151 AC008687.6-201ENST00000596318 630 ntBASIC17.62■□□□□ 0.41
PDLIM1O00151 ITM2C-210ENST00000620962 501 ntBASIC17.62■□□□□ 0.41
PDLIM1O00151 AC006557.6-201ENST00000623071 864 ntBASIC17.62■□□□□ 0.41
PDLIM1O00151 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDLIM1O00151 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms