Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 LINC01238-205ENST00000567549 1107 ntBASIC19.19■□□□□ 0.66
SRRM3A6NNA2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRRM3A6NNA2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 AC022616.7-201ENST00000525383 220 ntBASIC19.18■□□□□ 0.66
SRRM3A6NNA2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 AC134043.2-201ENST00000624206 2238 ntBASIC19.18■□□□□ 0.66
SRRM3A6NNA2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRRM3A6NNA2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 AC020763.4-201ENST00000623414 4170 ntBASIC19.17■□□□□ 0.66
SRRM3A6NNA2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRRM3A6NNA2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.16■□□□□ 0.66
SRRM3A6NNA2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 AC012317.2-201ENST00000623305 2251 ntBASIC19.16■□□□□ 0.66
SRRM3A6NNA2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 AK4P3-201ENST00000418260 669 ntBASIC19.16■□□□□ 0.66
SRRM3A6NNA2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
SRRM3A6NNA2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms