Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC133963.1-201ENST00000504166 1679 ntBASIC13.08□□□□□ -0.32
LINC01546A6NGU7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 KRT8P41-201ENST00000533985 1514 ntBASIC13.08□□□□□ -0.32
LINC01546A6NGU7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01546A6NGU7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 AC092437.1-201ENST00000624794 1048 ntBASIC13.07□□□□□ -0.32
LINC01546A6NGU7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01546A6NGU7 AC105020.1-201ENST00000435356 2205 ntBASIC13.07□□□□□ -0.32
LINC01546A6NGU7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 AP000593.1-201ENST00000393668 712 ntBASIC13.06□□□□□ -0.32
LINC01546A6NGU7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 POU5F1P3-201ENST00000428824 1078 ntBASIC13.06□□□□□ -0.32
LINC01546A6NGU7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 AC142381.2-201ENST00000566120 298 ntBASIC13.06□□□□□ -0.32
LINC01546A6NGU7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01546A6NGU7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms