Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 AC069152.1-201ENST00000438030 544 ntBASIC20.05■□□□□ 0.8
CCDC66A2RUB6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC66A2RUB6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC66A2RUB6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 UNC93B4-201ENST00000505679 747 ntBASIC20.03■□□□□ 0.8
CCDC66A2RUB6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC66A2RUB6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 TSPY21P-201ENST00000433481 731 ntBASIC20.02■□□□□ 0.8
CCDC66A2RUB6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC66A2RUB6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms