Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 CKBP1-201ENST00000565489 1086 ntBASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 AC026271.3-201ENST00000571884 352 ntBASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 AC006058.3-201ENST00000606217 1069 ntBASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 CR392000.1-201ENST00000624770 1228 ntBASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
LINC00959A0A1B0GUT2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00959A0A1B0GUT2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.65□□□□□ -0.39
LINC00959A0A1B0GUT2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00959A0A1B0GUT2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FAM207BP-201ENST00000447172 505 ntBASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 MYLKP1-201ENST00000509077 1580 ntBASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00959A0A1B0GUT2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00959A0A1B0GUT2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms