Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 AC067930.6-201ENST00000623257 4947 ntBASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPCS1Q9Y6A9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SPCS1Q9Y6A9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 SBF1P1-201ENST00000444527 5631 ntBASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 HES4-204ENST00000484667 667 ntTSL 3 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 C8orf49-201ENST00000525043 1968 ntBASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS1Q9Y6A9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS1Q9Y6A9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms